6H04 Immune System date Jul 06, 2018
title Closed Conformation Of The Membrane Attack Complex
authors A.Menny, M.Serna, C.M.Boyd, S.Gardner, A.P.Joseph, M.Topf, D.Bubec
compound source
Molecule: Complement Component C9
Chain: L, M, N, O, Q, R, S, T, U, V, W, X, P, H, I, J, K, G
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Complement C5,Complement C5
Chain: A
Synonym: C3 And Pzp-Like Alpha-2-Macroglobulin Domain-Conta Protein 4,C3 And Pzp-Like Alpha-2-Macroglobulin Domain-Cont Protein 4;
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Complement Component C8 Beta Chain
Chain: C
Synonym: Complement Component 8 Subunit Beta
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Complement Component C7
Chain: D
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Complement Component C8 Gamma Chain
Chain: E
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Complement Component C8 Alpha Chain
Chain: F
Synonym: Complement Component 8 Subunit Alpha
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Complement Component C6
Chain: B
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 5.60 Å
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • endopeptidase inhibitor acti...
  • chemokine activity


    • B


    C


    D


    E


    F


    S, T, N, K, V, Q, M, L, J, O, W, X, P, H, R, I, G, U


    Primary referenceCryoEM reveals how the complement membrane attack complex ruptures lipid bilayers., Menny A, Serna M, Boyd CM, Gardner S, Joseph AP, Morgan BP, Topf M, Brooks NJ, Bubeck D, Nat Commun. 2018 Dec 14;9(1):5316. doi: 10.1038/s41467-018-07653-5. PMID:30552328
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1760 Kb) [Save to disk]
  • Biological Unit Coordinates (6h04.pdb1.gz) 1733 Kb
  • LPC: Ligand-Protein Contacts for 6H04
  • CSU: Contacts of Structural Units for 6H04
  • Retrieve 6H04 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6H04 from S2C, [Save to disk]
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    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6h04_B] [6h04_Q] [6h04_K] [6h04_N] [6h04_V] [6h04_S] [6h04_J] [6h04_P] [6h04_C] [6h04_U] [6h04_R] [6h04_D] [6h04_I] [6h04_E] [6h04_O] [6h04_H] [6h04_G] [6h04_X] [6h04_W] [6h04_T] [6h04_L] [6h04_M] [6h04_F] [6h04_A]
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    • Other resources with information on 6H04
  • Community annotation for 6H04 at PDBWiki (http://pdbwiki.org)

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