6HB4	Dna Binding Protein	date	Aug 09, 2018
title	Tfam In Complex With Site-Y
authors	A.Cuppari, P.Fernandez-Millan, A.Rubio-Cosials, A.Tarres-Sole, S.Lyonnais, M.Sola
compound		source
Molecule: Transcription Factor A, Mitochondrial Chain: A, D, G, J Synonym: Mttfa,Mitochondrial Transcription Factor 1,Mttf1, Transcription Factor 6,Tcf-6,Transcription Factor 6-Like 2; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tfam, Tcf6, Tcf6l2 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (5'Cptpgptpgpcpapgpapcpaptptpcpapaptptpg -3'); Chain: B, E, H, K Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: Mitochondrial Dna
Molecule: Dna (5'- D(Tpapapcpapaptptpgpapaptpgptpcptpgpcpap 3'); Chain: C, F, I, L Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: Mitochondrial Dna
symmetry	Space Group: C 1 2 1	R_factor 0.190 R_Free 0.236
crystal cell	length a length b length c angle alpha angle beta angle gamma 157.669 140.622 108.919 90.00 130.73 90.00
method	X-Ray Diffraction	resolution	3.05 Å
ligand	1PE, GOL	enzyme
Primary reference	DNA specificities modulate the binding of human transcription factor A to mitochondrial DNA control region., Cuppari A, Fernandez-Millan P, Battistini F, Tarres-Sole A, Lyonnais S, Iruela G, Ruiz-Lopez E, Enciso Y, Rubio-Cosials A, Prohens R, Pons M, Alfonso C, Toth K, Rivas G, Orozco M, Sola M, Nucleic Acids Res. 2019 May 22. pii: 5494731. doi: 10.1093/nar/gkz406. PMID:31114891

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (435 Kb) [Save to disk] Biological Unit Coordinates (6hb4.pdb1.gz) 108 Kb Biological Unit Coordinates (6hb4.pdb2.gz) 108 Kb Biological Unit Coordinates (6hb4.pdb3.gz) 108 Kb Biological Unit Coordinates (6hb4.pdb4.gz) 110 Kb LPC: Ligand-Protein Contacts for 6HB4 CSU: Contacts of Structural Units for 6HB4 Structure Factors (1409 Kb) Retrieve 6HB4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6HB4 from S2C, [Save to disk]

View 6HB4 in 3D

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Visual 3D analysis of 6HB4

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6hb4_E] [6hb4_G] [6hb4_C] [6hb4_H] [6hb4_A] [6hb4_K] [6hb4_I] [6hb4_J] [6hb4_L] [6hb4_B] [6hb4_D] [6hb4_F] SWISS-PROT database: Domain organization of by SWISSPFAM

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