6HC3	Dna Binding Protein	date	Aug 13, 2018
title	Tfam Bound To Site-X
authors	P.Fernandez-Millan, A.Cuppari, A.Tarres-Sole, A.Rubio-Cosials, S.Lyonnais, M.Sola
compound		source
Molecule: Transcription Factor A, Mitochondrial Chain: A, D, G, J Synonym: Mttfa,Mitochondrial Transcription Factor 1,Mttf1, Transcription Factor 6,Tcf-6,Transcription Factor 6-Like 2; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tfam, Tcf6, Tcf6l2 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dnarna (5'- D(Tpapapcpapapapapapaptptptpcpcpapcpcpap 3'); Chain: B, E, H, K Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Dna (5'- D(Tptptpgpgptpgpgpapapaptptptptptptpgptp 3'); Chain: C, F, I, L Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: C 1 2 1	R_factor 0.188 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 164.790 145.136 108.119 90.00 130.83 90.00
method	X-Ray Diffraction	resolution	3.10 Å
ligand	1PE, TLA	enzyme
Primary reference	DNA specificities modulate the binding of human transcription factor A to mitochondrial DNA control region., Cuppari A, Fernandez-Millan P, Battistini F, Tarres-Sole A, Lyonnais S, Iruela G, Ruiz-Lopez E, Enciso Y, Rubio-Cosials A, Prohens R, Pons M, Alfonso C, Toth K, Rivas G, Orozco M, Sola M, Nucleic Acids Res. 2019 May 22. pii: 5494731. doi: 10.1093/nar/gkz406. PMID:31114891

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (432 Kb) [Save to disk] Biological Unit Coordinates (6hc3.pdb1.gz) 104 Kb Biological Unit Coordinates (6hc3.pdb2.gz) 109 Kb Biological Unit Coordinates (6hc3.pdb3.gz) 113 Kb Biological Unit Coordinates (6hc3.pdb4.gz) 104 Kb LPC: Ligand-Protein Contacts for 6HC3 CSU: Contacts of Structural Units for 6HC3 Structure Factors (351 Kb) Retrieve 6HC3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6HC3 from S2C, [Save to disk]

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Visual 3D analysis of 6HC3

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6hc3_K] [6hc3_C] [6hc3_D] [6hc3_H] [6hc3_I] [6hc3_L] [6hc3_F] [6hc3_G] [6hc3_A] [6hc3_B] [6hc3_E] [6hc3_J] SWISS-PROT database: Domain organization of by SWISSPFAM

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