6HC8 Gene Regulation date Aug 14, 2018
title Factor Inhibiting Hif (Fih) In Complex With Zinc, Nog And Tr 339)
authors T.M.Leissing, I.J.Clifton, B.G.Saward, X.Lu, R.J.Hopkinson, C.J.S
compound source
Molecule: Hypoxia-Inducible Factor 1-Alpha Inhibitor
Chain: A
Synonym: Factor Inhibiting Hif-1,Fih-1,Hypoxia-Inducible Fa Asparagine Hydroxylase;
Ec: 1.14.11.30,1.14.11.-
Engineered: Yes
Other_details: Unmodelled Gap Between Residues 3 And 9 Excl
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hif1an, Fih1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet28

Molecule: Transient Receptor Potential Cation Channel Subfa Member 1;
Chain: E
Synonym: Ankyrin-Like With Transmembrane Domains Protein 1, Transformation-Sensitive Protein P120;
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 41 21 2
R_factor 0.170 R_Free 0.189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.860 86.860 148.120 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand GOL, OGA, SO4, ZN enzyme Oxidoreductase E.C.1.14.11.30 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk]
  • Biological Unit Coordinates (6hc8.pdb1.gz) 247 Kb
  • LPC: Ligand-Protein Contacts for 6HC8
  • CSU: Contacts of Structural Units for 6HC8
  • Structure Factors (1238 Kb)
  • Retrieve 6HC8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HC8 from S2C, [Save to disk]
  • View 6HC8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6HC8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hc8_A] [6hc8_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6HC8
  • Community annotation for 6HC8 at PDBWiki (http://pdbwiki.org)

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