6HG4 Immune System date Aug 22, 2018
title Crystal Structure Of The Human Il-17rc Ecd In Complex With H 17f
authors J.M.Rondeau, A.Goepfert
compound source
Molecule: Interleukin-17f
Chain: A
Fragment: Il-17f
Synonym: Il-17f,Cytokine Ml-1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Il17f
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293s Gnti-
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pci-Derived

Molecule: Interleukin-17 Receptor C
Chain: B
Synonym: Il-17rc,Interleukin-17 Receptor Homolog,Il17rhom, Interleukin-17 Receptor-Like Protein,Il-17rl,Zcytor14;
Engineered: Yes
Mutation: Yes
Other_details: Q307r Variant With The Following N-Glycosyla
Mutations: ,N186q, N226q, N253q, N263q, N349q, N372q, N406q

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Il17rc, Unq6118pro20040pro38901
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293s Gnti-
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pci-Derived
symmetry Space Group: P 3 2 1
R_factor 0.198 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
154.322 154.322 78.792 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.32 Å
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk]
  • Biological Unit Coordinates (6hg4.pdb1.gz) 366 Kb
  • CSU: Contacts of Structural Units for 6HG4
  • Structure Factors (272 Kb)
  • Retrieve 6HG4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HG4 from S2C, [Save to disk]
  • View 6HG4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6HG4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6hg4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hg4_A] [6hg4_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6HG4
  • Community annotation for 6HG4 at PDBWiki (http://pdbwiki.org)

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