6HHO	Transferase	date	Aug 28, 2018
title	Crystal Structure Of Rip1 Kinase In Complex With Gsk547
authors	J.H.Thorpe, P.A.Harris
compound		source
Molecule: Receptor-Interacting Serinethreonine-Protein Kin Chain: A, B Synonym: Cell Death Protein Rip,Receptor-Interacting Protei Serinethreonine-Protein Kinase Rip; Ec: 2.7.11.1 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ripk1, Rip, Rip1 Expression_system: Baculovirus Expression Vector Pfastbac1- Expression_system_taxid: 274590
symmetry	Space Group: P 21 21 21	R_factor 0.208 R_Free 0.227
crystal cell	length a length b length c angle alpha angle beta angle gamma 102.649 130.370 50.839 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.49 Å
ligand	G4W	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	RIP1 Kinase Drives Macrophage-Mediated Adaptive Immune Tolerance in Pancreatic Cancer., Wang W, Marinis JM, Beal AM, Savadkar S, Wu Y, Khan M, Taunk PS, Wu N, Su W, Wu J, Ahsan A, Kurz E, Chen T, Yaboh I, Li F, Gutierrez J, Diskin B, Hundeyin M, Reilly M, Lich JD, Harris PA, Mahajan MK, Thorpe JH, Nassau P, Mosley JE, Leinwand J, Kochen Rossi JA, Mishra A, Aykut B, Glacken M, Ochi A, Verma N, Kim JI, Vasudevaraja V, Adeegbe D, Almonte C, Bagdatlioglu E, Cohen DJ, Wong KK, Bertin J, Miller G, Cancer Cell. 2018 Nov 12;34(5):757-774.e7. doi: 10.1016/j.ccell.2018.10.006. PMID:30423296

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk] Biological Unit Coordinates (6hho.pdb1.gz) 46 Kb Biological Unit Coordinates (6hho.pdb2.gz) 45 Kb LPC: Ligand-Protein Contacts for 6HHO CSU: Contacts of Structural Units for 6HHO Structure Factors (638 Kb) Retrieve 6HHO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6HHO from S2C, [Save to disk]

View 6HHO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6HHO

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6hho_A] [6hho_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6HHO

Community annotation for 6HHO at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---