6HIL Transcription date Aug 30, 2018
title X-Ray Structure Of Tead1(Y421h Mutant) Complexed With Yap(Wi Molecular And Structural Characterization Of A Tead Mutatio Origin Of Sveinsson'S Chorioretinal Atrophy
authors J.Kallen
compound source
Molecule: Transcriptional Enhancer Factor Tef-1
Chain: A, D, B, C
Fragment: C-Terminal Domain, Yap Binding Domain
Synonym: Ntef-1,Protein Gt-Iic,Tea Domain Family Member 1,T Transcription Factor 13,Tcf-13;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tead1, Tcf13, Tef1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28-Derived Vector

Molecule: Transcriptional Coactivator Yap1
Chain: L, O, M, N
Synonym: Yes-Associated Protein 1,Protein Yorkie Homolog,Ye Associated Protein Yap65 Homolog

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1
R_factor 0.243 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.125 46.544 144.337 98.61 90.85 108.14
method X-Ray Diffractionresolution 2.30 Å
Primary referenceMolecular and structural characterization of a TEAD mutation at the origin of Sveinsson's chorioretinal atrophy., Bokhovchuk F, Mesrouze Y, Izaac A, Meyerhofer M, Zimmermann C, Fontana P, Schmelzle T, Erdmann D, Furet P, Kallen J, Chene P, FEBS J. 2019 Mar 23. doi: 10.1111/febs.14817. PMID:30903741
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (168 Kb) [Save to disk]
  • Biological Unit Coordinates (6hil.pdb1.gz) 43 Kb
  • Biological Unit Coordinates (6hil.pdb2.gz) 43 Kb
  • Biological Unit Coordinates (6hil.pdb3.gz) 43 Kb
  • Biological Unit Coordinates (6hil.pdb4.gz) 43 Kb
  • CSU: Contacts of Structural Units for 6HIL
  • Structure Factors (1201 Kb)
  • Retrieve 6HIL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HIL from S2C, [Save to disk]
  • View 6HIL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6HIL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6hil from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hil_L] [6hil_C] [6hil_D] [6hil_O] [6hil_A] [6hil_B] [6hil_N] [6hil_M]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6HIL
  • Community annotation for 6HIL at PDBWiki (http://pdbwiki.org)

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