6HIP Splicing date Aug 30, 2018
title Structure Of Spf45 Uhm Bound To Hiv-1 Rev Ulm
authors M.Pabis, L.Corsini, M.Sattler
compound source
Molecule: Splicing Factor 45
Chain: A, B
Synonym: 45 Kda-Splicing Factor,Rna-Binding Motif Protein 1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rbm17, Spf45
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Hiv-1 Rev (41-49)
Chain: C
Engineered: Yes

Organism_scientific: Human Immunodeficiency Virus 1
Organism_taxid: 11676
Expression_system: Synthetic Construct
Expression_system_taxid: 32630
symmetry Space Group: P 21 21 21
R_factor 0.149 R_Free 0.175
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.210 63.680 67.630 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.20 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (6hip.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (6hip.pdb2.gz) 42 Kb
  • CSU: Contacts of Structural Units for 6HIP
  • Structure Factors (1715 Kb)
  • Retrieve 6HIP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HIP from S2C, [Save to disk]
  • View 6HIP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6HIP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6hip from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hip_A] [6hip_B] [6hip_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6HIP
  • Community annotation for 6HIP at PDBWiki (http://pdbwiki.org)

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