6HKA Transferase date Sep 06, 2018
title The Solution Structure Of The Micelle-Associated Fatc Domain Human Protein Kinase Ataxia Telangiectasia Mutated (Atm)
authors M.S.Abd Rahim, S.A.Dames
compound source
Molecule: Immunoglobulin G-Binding Protein G,Serine-Protein Atm;
Chain: A
Synonym: Igg-Binding Protein G,Ataxia Telangiectasia Mutate Mutated;
Ec: 2.7.11.1
Engineered: Yes
Other_details: N-Terminally Gb1-Tagged (1-56), Linker: Thro Enterokinase Sites (57-67), Fatc Domain Of Atm (68-100),N-T
Gb1-Tagged (1-56), Linker: Thrombin And Enterokinase Sites Fatc Domain Of Atm (68-100)
 Organism_scientific: Streptococcus Sp. Group G, Homo Sapien
Organism_common: Human
Organism_taxid: 1320, 9606
Gene: Spg, Atm
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Pgev2
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR- and MD simulation-based structural characterization of the membrane-associating FATC domain of ataxia telangiectasia mutated., Abd Rahim MS, Cherniavskyi YK, Tieleman DP, Dames SA, J Biol Chem. 2019 Mar 13. pii: RA119.007653. doi: 10.1074/jbc.RA119.007653. PMID:30867195
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (183 Kb) [Save to disk]
  • Biological Unit Coordinates (6hka.pdb1.gz) 10 Kb
  • CSU: Contacts of Structural Units for 6HKA
  • Original NMR restraints for 6HKA from PDB
  • Retrieve 6HKA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HKA from S2C, [Save to disk]
    • View 6HKA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6HKA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hka_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6HKA
  • Community annotation for 6HKA at PDBWiki (http://pdbwiki.org)

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