6HL6 Gene Regulation date Sep 10, 2018
title Factor Inhibiting Hif (Fih) In Complex With Zinc, Nog And Ia 693)
authors T.M.Leissing, R.Chowdhury, I.J.Clifton, X.Lu, C.J.Schofield
compound source
Molecule: Hypoxia-Inducible Factor 1-Alpha Inhibitor
Chain: A
Synonym: Factor Inhibiting Hif-1,Fih-1,Hypoxia-Inducible Fa Asparagine Hydroxylase;
Ec: 1.14.11.30,1.14.11.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hif1an, Fih1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a

Molecule: Rela-Associated Inhibitor
Chain: S
Synonym: Inhibitor Of Aspp Protein,Protein Iaspp,Nfkb-Inter Protein 1,Ppp1r13b-Like Protein;
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 41 21 2
R_factor 0.171 R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.084 86.084 148.752 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.97 Å
ligand GOL, OGA, SO4, ZN enzyme Oxidoreductase E.C.1.14.11.30 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk]
  • Biological Unit Coordinates (6hl6.pdb1.gz) 243 Kb
  • LPC: Ligand-Protein Contacts for 6HL6
  • CSU: Contacts of Structural Units for 6HL6
  • Structure Factors (1096 Kb)
  • Retrieve 6HL6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HL6 from S2C, [Save to disk]
  • View 6HL6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6HL6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hl6_A] [6hl6_S]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6HL6
  • Community annotation for 6HL6 at PDBWiki (http://pdbwiki.org)

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