6HPY Transcription date Sep 22, 2018
title Crystal Structure Of Enl (Mllt1) In Complex With Compound 12
authors D.Heidenreich, A.Chaikuad, C.H.Arrowsmith, A.M.Edwards, C.Bountr S.Knapp, Structural Genomics Consortium (Sgc)
compound source
Molecule: Protein Enl
Chain: A
Synonym: Yeats Domain-Containing Protein 1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mllt1, Enl, Ltg19, Yeats1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Rosetta
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic-Ch
symmetry Space Group: P 43 21 2
R_factor 0.217 R_Free 0.260
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.039 49.039 132.729 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-Based Approach toward Identification of Inhibitory Fragments for Eleven-Nineteen-Leukemia Protein (ENL)., Heidenreich D, Moustakim M, Schmidt J, Merk D, Brennan PE, Fedorov O, Chaikuad A, Knapp S, J Med Chem. 2018 Nov 26. doi: 10.1021/acs.jmedchem.8b01457. PMID:30407816
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (6hpy.pdb1.gz) 52 Kb
  • CSU: Contacts of Structural Units for 6HPY
  • Structure Factors (741 Kb)
  • Retrieve 6HPY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HPY from S2C, [Save to disk]
  • View 6HPY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6HPY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6hpy from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hpy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6HPY
  • Community annotation for 6HPY at PDBWiki (http://pdbwiki.org)

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