6HSW Hydrolase date Oct 02, 2018
title A Ce15 Glucuronoyl Esterase From Teredinibacter Turnerae T79
authors S.Mazurkewich, L.Lo Leggio, J.C.Navarro Poulsen, J.Larsbrink
compound source
Molecule: Carbohydrate Esterase Family 15 Domain Protein
Chain: A, B, C
Engineered: Yes
 Organism_scientific: Teredinibacter Turnerae T7901
Organism_taxid: 377629
Gene: Tertu_0517
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Modified Pet28-A
symmetry Space Group: P 31 2 1
R_factor 0.164 R_Free 0.212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
121.173 121.173 198.203 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.15 Å
ligand 1PE, BR, EDO, GOL, MSE, PEG enzyme
Primary referenceStructure-function analyses reveal that a glucuronoyl esterase from Teredinibacter turnerae interacts with carbohydrates and aromatic compounds., Arnling Baath J, Mazurkewich S, Poulsen JN, Olsson L, Lo Leggio L, Larsbrink J, J Biol Chem. 2019 Apr 19;294(16):6635-6644. doi: 10.1074/jbc.RA119.007831. Epub, 2019 Feb 27. PMID:30814248
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (412 Kb) [Save to disk]
  • Biological Unit Coordinates (6hsw.pdb1.gz) 138 Kb
  • Biological Unit Coordinates (6hsw.pdb2.gz) 139 Kb
  • Biological Unit Coordinates (6hsw.pdb3.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 6HSW
  • CSU: Contacts of Structural Units for 6HSW
  • Structure Factors (3166 Kb)
  • Retrieve 6HSW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HSW from S2C, [Save to disk]
    • View 6HSW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6HSW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hsw_C] [6hsw_A] [6hsw_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6HSW
  • Community annotation for 6HSW at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science