6HU9 Oxidoreductase Electron Transport date Oct 05, 2018
title Iii2-Iv2 Mitochondrial Respiratory Supercomplex From S. Cere
authors A.M.Hartley, N.Pinotsis, A.Marechal
compound source
Molecule: Cytochrome B-C1 Complex Subunit 1, Mitochondrial
Chain: A, L
Synonym: Complex III Subunit 1,Core Protein I,Ubiquinol-Cyt Reductase Complex Core Protein 1;
 Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome B-C1 Complex Subunit 2, Mitochondrial
Chain: B, M
Synonym: Complex III Subunit 2,Core Protein II,Ubiquinol-Cy Reductase Complex Core Protein 2;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome B
Chain: C, N
Synonym: Complex III Subunit 3,Complex III Subunit Cytb,Com Subunit III,Cytochrome B-C1 Complex Subunit 3,Cytochrome B- Subunit Cytb,Ubiquinol-Cytochrome-C Reductase Complex Cytoc Subunit;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C1, Heme Protein, Mitochondrial
Chain: D, O
Synonym: Complex III Subunit 4,Complex III Subunit Iv,Cytoc Complex Subunit 4,Ubiquinol-Cytochrome-C Reductase Complex C1 Subunit,Cytochrome C-1;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome B-C1 Complex Subunit Rieske, Mitochond
Chain: E, P
Synonym: Complex III Subunit 5,Rieske Iron-Sulfur Protein,R Ubiquinol-Cytochrome C Reductase Iron-Sulfur Subunit;
Ec: 1.10.2.2
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome B-C1 Complex Subunit 6
Chain: F, Q
Synonym: Complex III Subunit 6,Complex III Subunit Vi,Cytoc Non-Heme 17 Kda Protein,Mitochondrial Hinge Protein,Ubiquin Cytochrome C Reductase Complex 17 Kda Protein;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome B-C1 Complex Subunit 7
Chain: G, R
Synonym: Complex III Subunit 7,Complex III Subunit Vii,Ubiq Cytochrome C Reductase C Reductase Complex 14 Kda Protein;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome B-C1 Complex Subunit 8
Chain: H, S
Synonym: Complex III Subunit 8,Complex III Subunit Vii,Ubiq Cytochrome C Reductase Complex 11 Kda Protein,Ubiquinol-Cyt Reductase Complex Ubiquinone-Binding Protein Qp-C;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome B-C1 Complex Subunit 9
Chain: I, T
Synonym: Complex III Subunit 9,Complex III Subunit X,Cytoch Non-Heme 7.3 Kda Protein,Ubiquinol-Cytochrome C Reductase C Kda Protein;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome B-C1 Complex Subunit 10
Chain: J, U
Synonym: Complex III Subunit 10,Complex III Subunit Xi,Ubiq Cytochrome C Reductase Complex 8.5 Kda Protein;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Subunit 1
Chain: a, m
Synonym: Cytochrome C Oxidase Polypeptide I, Cox1
Ec: 1.9.3.1
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Subunit 2
Chain: b, n
Synonym: Cytochrome C Oxidase Polypeptide II, Cox2
Ec: 1.9.3.1
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Subunit 3
Chain: c, o
Synonym: Cytochrome C Oxidase Polypeptide III, Cox3
Ec: 1.9.3.1
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Subunit 4, Mitochondrial
Chain: d, p
Synonym: Cytochrome C Oxidase Polypeptide Iv, Cox4
Ec: 1.9.3.1
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Polypeptide 5a, Mitochondria
Chain: e, q
Synonym: Cytochrome C Oxidase Polypeptide Va, Cox5a
Ec: 1.9.3.1
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Subunit 6, Mitochondrial
Chain: f, r
Synonym: Cytochrome C Oxidase Polypeptide Vi, Cox6
Ec: 1.9.3.1
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Subunit 7
Chain: g, s
Synonym: Cytochrome C Oxidase Polypeptide Vii, Cox7
Ec: 1.9.3.1
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Polypeptide Viii, Mitochondr
Chain: h, t
Ec: 1.9.3.1
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Subunit 7a
Chain: I, u
Synonym: Cytochrome C Oxidase Polypeptide Viia, Cox9
Ec: 1.9.3.1
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Subunit 6b
Chain: j, v
Synonym: Cytochrome C Oxidase Polypeptide Vib, Cox12
Ec: 1.9.3.1
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Cytochrome C Oxidase Subunit 6a, Mitochondrial
Chain: k, w
Synonym: Cytochrome C Oxidase Polypeptide Via, Cox13
Ec: 1.9.3.1
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: Cox13, Ygl191w, G1341
Expression_system: Saccharomyces Cerevisiae
Expression_system_taxid: 4932
Expression_system_strain: W303-1b

Molecule: Cox26
Chain: l, x
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.35 Å
ligand CA, CDL, CU, CUA, FES, HEA, HEC, HEM, MG, PCF, PEF, UQ6, ZN enzyme Oxidoreductase E.C.1.10.2.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B, M


D, O


E, P


F, Q


G, R


J, U


L, A
  • ubiquinol-cytochrome-c reduc...


    • N, C


    S, H


    T, I


    a, m


    b, n
  • cytochrome-c oxidase activit...


    • c, o
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


    • d, p


    e, q


    g, s
  • cytochrome-c oxidase activit...


    • j, v
  • cytochrome-c oxidase activit...


    • k, w
  • cytochrome-c oxidase activit...
  • enzyme regulator activity


    • r, f


    t, h


    u, i
  • cytochrome-c oxidase activit...


    • x, l


    Primary referenceStructure of yeast cytochrome c oxidase in a supercomplex with cytochrome bc1., Hartley AM, Lukoyanova N, Zhang Y, Cabrera-Orefice A, Arnold S, Meunier B, Pinotsis N, Marechal A, Nat Struct Mol Biol. 2019 Jan;26(1):78-83. doi: 10.1038/s41594-018-0172-z. Epub, 2018 Dec 31. PMID:30598554
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1166 Kb) [Save to disk]
  • Biological Unit Coordinates (6hu9.pdb1.gz) 1138 Kb
  • LPC: Ligand-Protein Contacts for 6HU9
  • CSU: Contacts of Structural Units for 6HU9
  • Retrieve 6HU9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6HU9 from S2C, [Save to disk]
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  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6hu9_b] [6hu9_s] [6hu9_Q] [6hu9_h] [6hu9_x] [6hu9_B] [6hu9_q] [6hu9_v] [6hu9_G] [6hu9_j] [6hu9_J] [6hu9_L] [6hu9_E] [6hu9_m] [6hu9_D] [6hu9_H] [6hu9_d] [6hu9_C] [6hu9_I] [6hu9_k] [6hu9_a] [6hu9_n] [6hu9_i] [6hu9_U] [6hu9_R] [6hu9_F] [6hu9_f] [6hu9_S] [6hu9_P] [6hu9_o] [6hu9_N] [6hu9_p] [6hu9_l] [6hu9_T] [6hu9_t] [6hu9_A] [6hu9_r] [6hu9_u] [6hu9_c] [6hu9_g] [6hu9_M] [6hu9_O] [6hu9_e] [6hu9_w]
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