6I7G Transferase date Nov 16, 2018
title Crystal Structure Of Dimeric Wild Type Ficd Complexed With A
authors L.A.Perera, Y.Yan, R.J.Read, D.Ron
compound source
Molecule: Adenosine Monophosphate-Protein Transferase Ficd
Chain: A, B
Synonym: Ampylator Ficd,De-Ampylase Ficd,Fic Domain-Contain Protein,Huntingtin Yeast Partner E,Huntingtin-Interacting P Hip-13,Huntingtin-Interacting Protein E;
Ec: 2.7.7.-,3.1.4.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ficd, Hip13, Hype, Unq3041pro9857
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_variant: T7 Express Lysyiq
symmetry Space Group: P 21 21 2
R_factor 0.283 R_Free 0.319
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.671 107.652 132.597 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand 1PE, ATP, PEG, PG4 enzyme Transferase E.C.2.7.7 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk]
  • Biological Unit Coordinates (6i7g.pdb1.gz) 111 Kb
  • LPC: Ligand-Protein Contacts for 6I7G
  • CSU: Contacts of Structural Units for 6I7G
  • Structure Factors (1321 Kb)
  • Retrieve 6I7G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6I7G from S2C, [Save to disk]
    • View 6I7G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6I7G
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6i7g_B] [6i7g_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6I7G
  • Community annotation for 6I7G at PDBWiki (http://pdbwiki.org)

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