6I9J Cytokine date Nov 23, 2018
title Human Transforming Growth Factor Beta2 In A Tetragonal Cryst
authors F.X.Gomis-Ruth, L.Marino-Puertas, L.Del Amo-Maestro, T.Goulas
compound source
Molecule: Transforming Growth Factor Beta-2 Proprotein
Chain: A
Synonym: Cetermin,Glioblastoma-Derived T-Cell Suppressor Fa Tsf;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tgfb2
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Expi293f Tm Cells
Expression_system_vector_type: Sport6
symmetry Space Group: P 41 21 2
R_factor 0.217 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.570 55.570 70.570 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (6i9j.pdb1.gz) 77 Kb
  • CSU: Contacts of Structural Units for 6I9J
  • Structure Factors (68 Kb)
  • Retrieve 6I9J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6I9J from S2C, [Save to disk]
  • View 6I9J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6I9J
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6i9j from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6i9j_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6I9J
  • Community annotation for 6I9J at PDBWiki (http://pdbwiki.org)

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