6IAP	Immune System	date	Nov 27, 2018
title	Structure Of Human Nkp46 In Complex With Antibody Nkp46-1 An
authors	A.Roussel, B.Amigues
compound		source
Molecule: Natural Cytotoxicity Triggering Receptor 1 Chain: A Synonym: Lymphocyte Antigen 94 Homolog,Nk Cell-Activating R Natural Killer Cell P46-Related Protein,Hnkp46; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ncr1, Ly94 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108
Molecule: Fab Nkp46-4 Light Chain Chain: D Engineered: Yes		Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029
Molecule: Fab Nkp46-4 Heavy Chain Chain: E Engineered: Yes		Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029
Molecule: Fab Nkp46-1 Heavy Chain Chain: H Engineered: Yes		Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029
Molecule: Fab Nkp46-1 Light Chain Chain: L Engineered: Yes		Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Cricetulus Griseus Expression_system_common: Chinese Hamster Expression_system_taxid: 10029
symmetry	Space Group: P 1 21 1	R_factor 0.187 R_Free 0.263
crystal cell	length a length b length c angle alpha angle beta angle gamma 67.858 73.827 128.518 90.00 90.57 90.00
method	X-Ray Diffraction	resolution	2.90 Å
Primary reference	Multifunctional Natural Killer Cell Engagers Targeting NKp46 Trigger Protective Tumor Immunity., Gauthier L, Morel A, Anceriz N, Rossi B, Blanchard-Alvarez A, Grondin G, Trichard S, Cesari C, Sapet M, Bosco F, Rispaud-Blanc H, Guillot F, Cornen S, Roussel A, Amigues B, Habif G, Caraguel F, Arrufat S, Remark R, Romagne F, Morel Y, Narni-Mancinelli E, Vivier E, Cell. 2019 May 30. pii: S0092-8674(19)30460-X. doi: 10.1016/j.cell.2019.04.041. PMID:31155232

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (359 Kb) [Save to disk] Biological Unit Coordinates (6iap.pdb1.gz) 346 Kb CSU: Contacts of Structural Units for 6IAP Structure Factors (973 Kb) Retrieve 6IAP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6IAP from S2C, [Save to disk]

View 6IAP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6IAP

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 6iap from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6iap_L] [6iap_E] [6iap_A] [6iap_H] [6iap_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6IAP

Community annotation for 6IAP at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014 Bioinformatics Unit Weizmann Institute of Science

---