6IGL Signaling Protein Protein Binding date Sep 25, 2018
title Crystal Structure Of Human Etb Receptor In Complex With Irl1
authors W.Shihoya, T.Izume, A.Inoue, K.Yamashita, F.M.N.Kadji, K.Hirata, J T.Nishizawa, O.Nureki
compound source
Molecule: Endothelin Receptor Type B,Endolysin,Endothelin R Type B;
Chain: A
Synonym: Et-Br,Endothelin Receptor Non-Selective Type,Lysis Lysozyme,Muramidase;
Ec: 3.2.1.17
Engineered: Yes
Mutation: Yes
Other_details: Chimera Protein Of Endothelin Receptor Type With Endolysin Between Residues 303 And 311.;
 Organism_scientific: Homo Sapiens, Enterobacteria Phage Rb5
Organism_common: Human
Organism_taxid: 9606, 697290
Gene: Ednrb, Etrb, E, Rb59_126
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Modified Pfastbac

Molecule: Irl1620
Chain: B
Engineered: Yes
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
symmetry Space Group: C 2 2 21
R_factor 0.207 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.980 303.860 60.160 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand CIT, OLC, SIN, SO4 enzyme Hydrolase E.C.3.2.1.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (6igl.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 6IGL
  • CSU: Contacts of Structural Units for 6IGL
  • Structure Factors (834 Kb)
  • Retrieve 6IGL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6IGL from S2C, [Save to disk]
    • View 6IGL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6IGL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6igl_A] [6igl_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6IGL
  • Community annotation for 6IGL at PDBWiki (http://pdbwiki.org)

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