6IID	Hydrolase Dna	date	Oct 04, 2018
title	Human Exog-H140a In Complex With Rna-Dna Chimeric Duplex
authors	C.C.Wu, J.L.J.Lin, H.S.Yuan
compound		source
Molecule: Nuclease Exog, Mitochondrial Chain: A, B, C, D Synonym: Endonuclease G-Like 1,Endo G-Like 1 Ec: 3.1.30.- Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Exog, Endogl1, Endogl2, Engl Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta 2 (De3) Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a
Molecule: Dnarna (5'-R(Pcpgpgpgpa)-D(Pt)-R(Pg)-D(P R(Pcpapcpg)-3'); Chain: E, G, I, K Synonym: R2-Dna Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Dna (5'-D(Cpgptpgpapcpaptpcpcpcpg)-3' Chain: F, H, J, L Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 1	R_factor 0.199 R_Free 0.252
crystal cell	length a length b length c angle alpha angle beta angle gamma 73.710 75.953 81.152 72.96 90.01 70.75
method	X-Ray Diffraction	resolution	2.99 Å
ligand	MG	enzyme	Hydrolase E.C.3.1.30 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	A unique exonuclease ExoG cleaves between RNA and DNA in mitochondrial DNA replication., Wu CC, Lin JLJ, Yang-Yen HF, Yuan HS, Nucleic Acids Res. 2019 Apr 5. pii: 5428310. doi: 10.1093/nar/gkz241. PMID:30949702

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (404 Kb) [Save to disk] Biological Unit Coordinates (6iid.pdb1.gz) 204 Kb Biological Unit Coordinates (6iid.pdb2.gz) 197 Kb LPC: Ligand-Protein Contacts for 6IID CSU: Contacts of Structural Units for 6IID Structure Factors (987 Kb) Retrieve 6IID in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6IID from S2C, [Save to disk]

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Visual 3D analysis of 6IID

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Structure-derived information

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Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6iid_I] [6iid_F] [6iid_H] [6iid_L] [6iid_G] [6iid_B] [6iid_D] [6iid_K] [6iid_A] [6iid_E] [6iid_J] [6iid_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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