6IOM Cell Adhesion date Oct 30, 2018
title Crystal Structure Of Human C4.4a
authors M.D.Huang, Y.B.Jiang, C.Yuan, L.Lin
compound source
Molecule: Ly6plaur Domain-Containing Protein 3
Chain: A, B
Fragment: Unp Residues 31-231
Synonym: Gpi-Anchored Metastasis-Associated Protein C4.4a H Matrigel-Induced Gene C4 Protein,Mig-C4;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: C4.4a
Expression_system: Drosophila Melanogaster
Expression_system_taxid: 7227
symmetry Space Group: C 2 2 21
R_factor 0.198 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.055 120.156 169.431 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.59 Å
ligand NAG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (6iom.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (6iom.pdb2.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 6IOM
  • CSU: Contacts of Structural Units for 6IOM
  • Structure Factors (494 Kb)
  • Retrieve 6IOM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6IOM from S2C, [Save to disk]
    • View 6IOM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6IOM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6iom_A] [6iom_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6IOM
  • Community annotation for 6IOM at PDBWiki (http://pdbwiki.org)

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