6IYV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 2RG, GOL, PEG, SO4, TRS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe 1-beta-methyl group confers a lower affinity of l,d-transpeptidase LdtMt2 for ertapenem than for imipenem., Zhao F, Hou YJ, Zhang Y, Wang DC, Li DF, Biochem Biophys Res Commun. 2019 Mar 5;510(2):254-260. doi:, 10.1016/j.bbrc.2019.01.082. Epub 2019 Jan 25. PMID:30686533
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (6iyv.pdb1.gz) 51 Kb
  • Biological Unit Coordinates (6iyv.pdb2.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 6IYV
  • CSU: Contacts of Structural Units for 6IYV
  • Structure Factors (523 Kb)
  • Retrieve 6IYV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6IYV from S2C, [Save to disk]
  • View 6IYV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6iyv_A] [6iyv_B]
  • SWISS-PROT database:

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