6JJY Signaling Protein date Feb 27, 2019
title Crystal Structure Of Kibra And Beta-Dystroglycan
authors Z.Lin, Z.Yang, Z.Ji, M.Zhang
compound source
Molecule: Protein Kibra
Chain: A
Synonym: Kidney And Brain Protein,Kibra,Ww Domain-Containin 1;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Wwc1, Kiaa0869
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Peptide From Dystroglycan
Chain: U
Synonym: Dystrophin-Associated Glycoprotein 1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dag1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 3 2 1
R_factor 0.206 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.483 73.483 105.322 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
U


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (6jjy.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 6JJY
  • CSU: Contacts of Structural Units for 6JJY
  • Structure Factors (106 Kb)
  • Retrieve 6JJY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6JJY from S2C, [Save to disk]
  • View 6JJY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6JJY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6jjy_U] [6jjy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6JJY
  • Community annotation for 6JJY at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science