6K4Y CryoEM structure of sigma appropriation complex date
authors Shi, J., Wen, A., Feng, Y.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.79
ligand MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


C


D


E


F
  • bacterial sigma factor activ...


    • I


    M


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (609 Kb) [Save to disk]
  • Biological Unit Coordinates (6k4y.pdb1.gz) 601 Kb
  • LPC: Ligand-Protein Contacts for 6K4Y
  • CSU: Contacts of Structural Units for 6K4Y
  • Retrieve 6K4Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6K4Y from S2C, [Save to disk]
    • View 6K4Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6K4Y
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6k4y from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6k4y_M] [6k4y_T] [6k4y_C] [6k4y_I] [6k4y_A] [6k4y_F] [6k4y_E] [6k4y_N] [6k4y_D] [6k4y_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6K4Y
  • Community annotation for 6K4Y at PDBWiki (http://pdbwiki.org)

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