6KAJ Transferase date Jun 23, 2019
title Crystal Structure Of Fkrp In Complex With Ba Ion
authors N.Kuwabara
compound source
Molecule: Fukutin-Related Protein
Chain: A, B, C, D
Synonym: Ribitol-5-Phosphate Transferase
Ec: 2.4.2.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fkrp
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293s Gnt-
symmetry Space Group: P 21 21 21
R_factor 0.209 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.369 118.820 253.080 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.22 Å
ligand BA, CDP, NAG, RB0, ZN enzyme Transferase E.C.2.4.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (595 Kb) [Save to disk]
  • Biological Unit Coordinates (6kaj.pdb1.gz) 585 Kb
  • LPC: Ligand-Protein Contacts for 6KAJ
  • CSU: Contacts of Structural Units for 6KAJ
  • Structure Factors (4062 Kb)
  • Retrieve 6KAJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6KAJ from S2C, [Save to disk]
    • View 6KAJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6KAJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6kaj_C] [6kaj_B] [6kaj_D] [6kaj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6KAJ
  • Community annotation for 6KAJ at PDBWiki (http://pdbwiki.org)

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