6KIU Transcription Dna date Jul 20, 2019
title Cryo-Em Structure Of Human Mll1-Ubncp Complex (3.2 Angstrom)
authors J.Huang, H.Xue, T.Yao
compound source
Molecule: Histone H3
Chain: A, E
Engineered: Yes
 Organism_scientific: Xenopus Laevis
Organism_common: African Clawed Frog
Organism_taxid: 8355
Gene: Xelaev_18002543mg
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Histone H4
Chain: B, F
Engineered: Yes
Organism_scientific: Xenopus Laevis
Organism_common: African Clawed Frog
Organism_taxid: 8355
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Histone H2a
Chain: C, G
Engineered: Yes
Organism_scientific: Xenopus Laevis
Organism_common: African Clawed Frog
Organism_taxid: 8355
Gene: Hist1h2aj, Loc494591, Xelaev_18003602mg
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Histone H2b 1.1
Chain: D, H
Synonym: H2b1.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Xenopus Laevis
Organism_common: African Clawed Frog
Organism_taxid: 8355
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Dna (145-Mer)
Chain: I
Engineered: Yes
Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630

Molecule: Dna (145-Mer)
Chain: J
Engineered: Yes
Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630

Molecule: Histone-Lysine N-Methyltransferase 2a
Chain: K
Synonym: Lysine N-Methyltransferase 2a,All-1,Cxxc-Type Zinc Protein 7,Myeloidlymphoid Or Mixed-Lineage Leukemia,Myeloi Or Mixed-Lineage Leukemia Protein 1,Trithorax-Like Protein, Finger Protein Hrx;
Ec: 2.1.1.43
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kmt2a, All1, Cxxc7, Hrx, Htrx, Mll, Mll1, Trx1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Retinoblastoma-Binding Protein 5
Chain: N
Synonym: Rbbp-5,Retinoblastoma-Binding Protein Rbq-3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rbbp5, Rbq3
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Wd Repeat-Containing Protein 5
Chain: R
Synonym: Bmp2-Induced 3-Kb Gene Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Wdr5, Big3
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Set1ash2 Histone Methyltransferase Complex Subun
Chain: T
Synonym: Ash2-Like Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ash2l, Ash2l1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Ubiquitin
Chain: O
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rps27a, Uba80, Ubcep1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.20 Å
ligand GLN, LYS, SAH, ZN enzyme Transferase E.C.2.1.1.43 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, E


C, G


F, B


H, D


K


N


R


T


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (419 Kb) [Save to disk]
  • Biological Unit Coordinates (6kiu.pdb1.gz) 409 Kb
  • LPC: Ligand-Protein Contacts for 6KIU
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    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6kiu_F] [6kiu_N] [6kiu_G] [6kiu_J] [6kiu_E] [6kiu_D] [6kiu_K] [6kiu_B] [6kiu_H] [6kiu_A] [6kiu_O] [6kiu_R] [6kiu_I] [6kiu_T] [6kiu_C]
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