6KSW Transport Protein date Aug 26, 2019
title Cryo-Em Structure Of The Human Concentrative Nucleoside Tran Cnt3
authors Y.X.Zhou, L.H.Liao, J.L.Li, Q.J.Xiao, L.F.Sun, D.Deng
compound source
Molecule: Solute Carrier Family 28 Member 3
Chain: C, A, B
Synonym: Concentrative Na(+)-Nucleoside Cotransporter 3,Hcn
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Slc28a3, Cnt3
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.60 Å
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • pyrimidine- and adenine-spec...
  • purine-specific nucleoside:s...


    • Primary referenceCryo-EM structure of the human concentrative nucleoside transporter CNT3., Zhou Y, Liao L, Wang C, Li J, Chi P, Xiao Q, Liu Q, Guo L, Sun L, Deng D, PLoS Biol. 2020 Aug 10;18(8):e3000790. doi: 10.1371/journal.pbio.3000790., eCollection 2020 Aug. PMID:32776918
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (210 Kb) [Save to disk]
  • Biological Unit Coordinates (6ksw.pdb1.gz) 206 Kb
  • CSU: Contacts of Structural Units for 6KSW
  • Retrieve 6KSW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6KSW from S2C, [Save to disk]
    • View 6KSW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6KSW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ksw_C] [6ksw_B] [6ksw_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6KSW
  • Community annotation for 6KSW at PDBWiki (http://pdbwiki.org)

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