6L0O Dna Binding Protein date Sep 26, 2019
title Wh Domain Of Human Mcm8
authors Y.Liu, J.Li, L.Liu, H.Zeng
compound source
Molecule: Dna Helicase Mcm8
Chain: A
Synonym: Minichromosome Maintenance 8
Ec: 3.6.4.12
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mcm8, C20orf154
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: P 61
R_factor 0.120 R_Free 0.147
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.062 52.062 50.468 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.21 Å
ligand SO4 enzyme Hydrolase E.C.3.6.4.12 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the winged-helix domain of MCM8., Zeng H, Li J, Xu H, Li H, Liu Y, Biochem Biophys Res Commun. 2020 Apr 12. pii: S0006-291X(20)30647-1. doi:, 10.1016/j.bbrc.2020.03.150. PMID:32295713
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (6l0o.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 6L0O
  • CSU: Contacts of Structural Units for 6L0O
  • Structure Factors (527 Kb)
  • Retrieve 6L0O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6L0O from S2C, [Save to disk]
    • View 6L0O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6L0O
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6l0o_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6L0O
  • Community annotation for 6L0O at PDBWiki (http://pdbwiki.org)

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