6L3T Membrane Protein date Oct 15, 2019
title Human Cx31.3gjc3 Connexin Hemichannel In The Absence Of Cal
authors H.J.Lee, H.Jeong, B.Ryu, J.Hyun, J.S.Woo
compound source
Molecule: Gap Junction Gamma-3 Protein
Chain: A, B, C, D, E, F
Synonym: Connexin-30.2,Cx30.2,Connexin-31.3,Cx31.3,Gap Junc Epsilon-1 Protein;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gjc3, Gje1
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 2.34 Å
ligand LMN enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B
  • gap junction channel activit...
  • gap junction channel activit...


  • Primary referenceCryo-EM structure of human Cx31.3/GJC3 connexin hemichannel., Lee HJ, Jeong H, Hyun J, Ryu B, Park K, Lim HH, Yoo J, Woo JS, Sci Adv. 2020 Aug 28;6(35):eaba4996. doi: 10.1126/sciadv.aba4996. eCollection, 2020 Aug. PMID:32923625
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (364 Kb) [Save to disk]
  • Biological Unit Coordinates (6l3t.pdb1.gz) 344 Kb
  • LPC: Ligand-Protein Contacts for 6L3T
  • CSU: Contacts of Structural Units for 6L3T
  • Retrieve 6L3T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6L3T from S2C, [Save to disk]
  • View 6L3T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6L3T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6l3t_F] [6l3t_E] [6l3t_B] [6l3t_C] [6l3t_A] [6l3t_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6L3T
  • Community annotation for 6L3T at PDBWiki (http://pdbwiki.org)

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