6LDO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand KOU, PO4 enzyme
Primary referenceCatalytic specificity of the Lactobacillus plantarum cystathionine gamma-lyase presumed by the crystallographic analysis., Matoba Y, Noda M, Yoshida T, Oda K, Ezumi Y, Yasutake C, Izuhara-Kihara H, Danshiitsoodol N, Kumagai T, Sugiyama M, Sci Rep. 2020 Sep 10;10(1):14886. doi: 10.1038/s41598-020-71756-7. PMID:32913258
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (364 Kb) [Save to disk]
  • Biological Unit Coordinates (6ldo.pdb1.gz) 239 Kb
  • Biological Unit Coordinates (6ldo.pdb2.gz) 241 Kb
  • LPC: Ligand-Protein Contacts for 6LDO
  • CSU: Contacts of Structural Units for 6LDO
  • Structure Factors (2619 Kb)
  • Retrieve 6LDO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6LDO from S2C, [Save to disk]
  • View 6LDO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ldo_A] [6ldo_B] [6ldo_C] [6ldo_D] [6ldo_E] [6ldo_F]
  • SWISS-PROT database:

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