6LH1 Transport Protein date Dec 06, 2019
title Crystal Structure Of A Cysteine-Pair Mutant (Y113c-P190c) Of Bacterial Bile Acid Transporter Trapped In An Outward-Facin Conformation
authors X.Wang, Y.Lyu, Y.Ji, Z.Sun, X.Zhou
compound source
Molecule: Transporter, Sodiumbile Acid Symporter Family
Chain: A
Engineered: Yes
Mutation: Yes
Organism_scientific: Yersinia Frederiksenii
Organism_taxid: 29484
Gene: Nctc11470_02445
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.229 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.366 77.005 193.114 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.86 Å
ligand A6L, CIT enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (6lh1.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 6LH1
  • CSU: Contacts of Structural Units for 6LH1
  • Structure Factors (223 Kb)
  • Retrieve 6LH1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6LH1 from S2C, [Save to disk]
  • View 6LH1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6LH1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1k6lh1, region H:36-250 [Jmol] [rasmolscript] [script source]
  • Fold representative 6lh1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6lh1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6LH1
  • Community annotation for 6LH1 at PDBWiki (http://pdbwiki.org)

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