6LN6 Metal Transport date Dec 28, 2019
title Cryoem Structure Of Serca2b T1032stop In E1-2ca2+-Amppcp (Cl
authors Y.Zhang, A.Tsutsumi, S.Watanabe, K.Inaba
compound source
Molecule: Sarcoplasmicendoplasmic Reticulum Calcium Atpase
Chain: A
Synonym: Sr Ca(2+)-Atpase 2,Calcium Pump 2,Calcium-Transpor Atpase Sarcoplasmic Reticulum Type,Slow Twitch Skeletal Mus Isoform,Endoplasmic Reticulum Class 12 Ca(2+) Atpase;
Ec: 7.2.2.10
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Atp2a2, Atp2b
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 2.90 Å
ligand ACP, CA, MG enzyme E.C.7.2.2.10 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • proton-exporting ATPase acti...
  • calcium ion transport from c...

  • Primary referenceCryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail., Zhang Y, Inoue M, Tsutsumi A, Watanabe S, Nishizawa T, Nagata K, Kikkawa M, Inaba K, Sci Adv. 2020 Aug 12;6(33):eabb0147. doi: 10.1126/sciadv.abb0147. eCollection, 2020 Aug. PMID:32851169
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (147 Kb) [Save to disk]
  • Biological Unit Coordinates (6ln6.pdb1.gz) 140 Kb
  • LPC: Ligand-Protein Contacts for 6LN6
  • CSU: Contacts of Structural Units for 6LN6
  • Retrieve 6LN6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6LN6 from S2C, [Save to disk]
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  • Visual 3D analysis of 6LN6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ln6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6LN6
  • Community annotation for 6LN6 at PDBWiki (http://pdbwiki.org)

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