6MBI Lipid Binding Protein date Aug 29, 2018
title Crystal Structure Of Snx15 Px Domain In Domain Swapped Confo Form 2
authors M.Chandra, B.M.Collins
compound source
Molecule: Sorting Nexin-15
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Snx15
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 43 21 2
R_factor 0.278 R_Free 0.319
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.312 60.312 85.161 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.83 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceClassification of the human phox homology (PX) domains based on their phosphoinositide binding specificities., Chandra M, Chin YK, Mas C, Feathers JR, Paul B, Datta S, Chen KE, Jia X, Yang Z, Norwood SJ, Mohanty B, Bugarcic A, Teasdale RD, Henne WM, Mobli M, Collins BM, Nat Commun. 2019 Apr 4;10(1):1528. doi: 10.1038/s41467-019-09355-y. PMID:30948714
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (6mbi.pdb1.gz) 74 Kb
  • CSU: Contacts of Structural Units for 6MBI
  • Structure Factors (36 Kb)
  • Retrieve 6MBI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6MBI from S2C, [Save to disk]
  • View 6MBI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6MBI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6mbi_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6MBI
  • Community annotation for 6MBI at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science