6MGN Dna Binding Protein date Sep 14, 2018
title Mouse Id1 (51-104) - Human He47 (348-399) Complex
authors R.Benezra, N.P.Pavletich, A.L.Gall, Y.Goldgur
compound source
Molecule: Transcription Factor E2-Alpha
Chain: A
Fragment: Unp Residues 558-609
Synonym: Class B Basic Helix-Loop-Helix Protein 21,Bhlhb21, Immunoglobulin Enhancer-Binding Factor E12e47,Immunoglobul Transcription Factor 1,Kappa-E2-Binding Factor,Transcriptio 3,Tcf-3,Transcription Factor Itf-1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tcf3, Bhlhb21, E2a, Itf1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Dna-Binding Protein Inhibitor Id-1
Chain: B
Fragment: Unp Residues 59-104
Synonym: Inhibitor Of Dna Binding 1,Inhibitor Of Differenti
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Id1, Id, Id-1, Idb1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 42 21 2
R_factor 0.183 R_Free 0.218
length a length b length c angle alpha angle beta angle gamma
54.962 54.962 81.940 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (6mgn.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 6MGN
  • Structure Factors (171 Kb)
  • Retrieve 6MGN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6MGN from S2C, [Save to disk]
  • View 6MGN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6MGN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6mgn from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6mgn_B] [6mgn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6MGN
  • Community annotation for 6MGN at PDBWiki (http://pdbwiki.org)

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