6MOJ Biosynthetic Protein date Oct 04, 2018
title Dimeric Darpin A_angle_r5 Complex With Epor
authors K.M.Jude, K.Mohan, K.C.Garcia
compound source
Molecule: Dimeric Darpin Acr5 (A_angle_r5)
Chain: A
Engineered: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Erythropoietin Receptor
Chain: B
Synonym: Epo-R
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Epor
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: I 41 2 2
R_factor 0.210 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
130.418 130.418 293.453 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.43 Å
ligand GOL, TAR enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceTopological control of cytokine receptor signaling induces differential effects in hematopoiesis., Mohan K, Ueda G, Kim AR, Jude KM, Fallas JA, Guo Y, Hafer M, Miao Y, Saxton RA, Piehler J, Sankaran VG, Baker D, Garcia KC, Science. 2019 May 24;364(6442). pii: 364/6442/eaav7532. doi:, 10.1126/science.aav7532. Epub 2019 May 23. PMID:31123111
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk]
  • Biological Unit Coordinates (6moj.pdb1.gz) 280 Kb
  • LPC: Ligand-Protein Contacts for 6MOJ
  • CSU: Contacts of Structural Units for 6MOJ
  • Structure Factors (13293 Kb)
  • Retrieve 6MOJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6MOJ from S2C, [Save to disk]
  • View 6MOJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6MOJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6moj_B] [6moj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6MOJ
  • Community annotation for 6MOJ at PDBWiki (http://pdbwiki.org)

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