6MP6 Transport Protein date Oct 05, 2018
title Cryo-Em Structure Of The Human Neutral Amino Acid Transporte
authors X.Yu, S.Han
compound source
Molecule: Neutral Amino Acid Transporter B(0)
Chain: A, B, C
Synonym: Atb(0), Baboon M7 Virus Receptor, Rd114simian Typ Retrovirus Receptor, Sodium-Dependent Neutral Amino Acid Tr Type 2, Solute Carrier Family 1 Member 5;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Slc1a5, Asct2, M7v1, Rdr, Rdrc
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.54 Å
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • virus receptor activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (182 Kb) [Save to disk]
  • Biological Unit Coordinates (6mp6.pdb1.gz) 177 Kb
  • LPC: Ligand-Protein Contacts for 6MP6
  • CSU: Contacts of Structural Units for 6MP6
  • Retrieve 6MP6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6MP6 from S2C, [Save to disk]
  • View 6MP6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6MP6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6mp6_C] [6mp6_B] [6mp6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6MP6
  • Community annotation for 6MP6 at PDBWiki (http://pdbwiki.org)

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