6MUW Hydrolase date Oct 23, 2018
title The Structure Of The Plasmodium Falciparum 20s Proteasome.
authors R.D.Metcalfe, S.C.Xie, E.Hanssen, D.L.Gillett, A.P.Leis, L.Tilley M.D.W.Griffin
compound source
Molecule: 20s Proteasome Alpha-1 Subunit
Chain: A, O
Ec: 3.4.25.1
 Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Alpha-2 Subunit
Chain: B, P
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Alpha-3 Subunit
Chain: C, Q
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Alpha-4 Subunit
Chain: D, R
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Alpha-5 Subunit
Chain: E, S
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Alpha-6 Subunit
Chain: F, T
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Alpha-7 Subunit
Chain: G, U
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Beta-1 Subunit
Chain: H, V
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Beta-2 Subunit
Chain: I, W
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Beta-3 Subunit
Chain: J, X
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Beta-4 Subunit
Chain: K, Y
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Beta-5 Subunit
Chain: L, Z
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Beta-6 Subunit
Chain: M, a
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7

Molecule: 20s Proteasome Beta-7 Subunit
Chain: N, b
Ec: 3.4.25.1
Organism_scientific: Plasmodium Falciparum (Isolate 3d7)
Organism_taxid: 36329
Strain: Isolate 3d7
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.60 Å
ligand
enzyme Hydrolase E.C.3.4.25.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, O


D, R


F, T


G, U


J, X


K, Y


N, b


P, B


Q, C


S, E


V, H


Z, L, W, I


a, M


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (904 Kb) [Save to disk]
  • Biological Unit Coordinates (6muw.pdb1.gz) 897 Kb
  • CSU: Contacts of Structural Units for 6MUW
  • Retrieve 6MUW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6MUW from S2C, [Save to disk]
    • View 6MUW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6MUW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6muw_A] [6muw_N] [6muw_J] [6muw_W] [6muw_Q] [6muw_U] [6muw_I] [6muw_b] [6muw_a] [6muw_M] [6muw_G] [6muw_C] [6muw_F] [6muw_Y] [6muw_R] [6muw_S] [6muw_K] [6muw_Z] [6muw_L] [6muw_T] [6muw_B] [6muw_V] [6muw_H] [6muw_D] [6muw_X] [6muw_P] [6muw_O] [6muw_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6MUW
  • Community annotation for 6MUW at PDBWiki (http://pdbwiki.org)

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