6N34 Splicing date Nov 14, 2018
title Crystal Structure Of The Btb Domain Of Human Ns1-Bp
authors K.Zhang, G.Shang, A.Padavannil, B.Fontoura, Y.M.Chook
compound source
Molecule: Influenza Virus Ns1a-Binding Protein
Chain: A, B
Synonym: Ns1-Binding Protein,Aryl Hydrocarbon Receptor-Asso Protein 3,Kelch-Like Protein 39;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ivns1abp, Ara3, Flara3, Kiaa0850, Klhl39, Ns1, Ns1bp,
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
symmetry Space Group: P 21 21 21
R_factor 0.225 R_Free 0.297
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.866 72.599 92.858 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
Primary referenceStructural-functional interactions of NS1-BP protein with the splicing and mRNA export machineries for viral and host gene expression., Zhang K, Shang G, Padavannil A, Wang J, Sakthivel R, Chen X, Kim M, Thompson MG, Garcia-Sastre A, Lynch KW, Chen ZJ, Chook YM, Fontoura BMA, Proc Natl Acad Sci U S A. 2018 Dec 11. pii: 1818012115. doi:, 10.1073/pnas.1818012115. PMID:30538201
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (6n34.pdb1.gz) 80 Kb
  • CSU: Contacts of Structural Units for 6N34
  • Structure Factors (140 Kb)
  • Retrieve 6N34 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6N34 from S2C, [Save to disk]
  • View 6N34 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6N34
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6n34_B] [6n34_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6N34
  • Community annotation for 6N34 at PDBWiki (http://pdbwiki.org)

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