6N4X Membrane Protein date Nov 20, 2018
title Metabotropic Glutamate Receptor 5 Apo Form Ligand Binding Do
authors A.Koehl, H.Hu, D.Feng, B.Sun, W.I.Weis, G.S.Skiniotis, J.M.Mathies B.K.Kobilka
compound source
Molecule: Metabotropic Glutamate Receptor 5
Chain: A, B
Synonym: Mglur5
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Grm5, Gprc1e, Mglur5
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_atcc_number: Crl-1711
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pvl1392
symmetry Space Group: P 2 2 21
R_factor 0.270 R_Free 0.282
crystal
cell
length a length b length c angle alpha angle beta angle gamma
119.084 174.100 180.902 90.00 90.00 90.00
method X-Ray Diffractionresolution 4.00 Å
ligand MG, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural insights into the activation of metabotropic glutamate receptors., Koehl A, Hu H, Feng D, Sun B, Zhang Y, Robertson MJ, Chu M, Kobilka TS, Laermans T, Steyaert J, Tarrasch J, Dutta S, Fonseca R, Weis WI, Mathiesen JM, Skiniotis G, Kobilka BK, Nature. 2019 Feb;566(7742):79-84. doi: 10.1038/s41586-019-0881-4. Epub 2019 Jan, 23. PMID:30675062
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]
  • Biological Unit Coordinates (6n4x.pdb1.gz) 156 Kb
  • LPC: Ligand-Protein Contacts for 6N4X
  • CSU: Contacts of Structural Units for 6N4X
  • Structure Factors (1324 Kb)
  • Retrieve 6N4X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6N4X from S2C, [Save to disk]
  • View 6N4X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6N4X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6n4x_B] [6n4x_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6N4X
  • Community annotation for 6N4X at PDBWiki (http://pdbwiki.org)

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