6N7G Protein Binding date Nov 27, 2018
title Cryo-Em Structure Of Tetrameric Ptch1 In Complex With Shhnp
authors N.Yan, X.Gong, H.W.Qian
compound source
Molecule: Protein Patched Homolog 1
Chain: A, B, D, E
Synonym: Ptc1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptch1, Ptch
Expression_system: Homo Sapiens
Expression_system_taxid: 9606

Molecule: Sonic Hedgehog Protein
Chain: C, F
Synonym: Shh,Hhg-1,Shh Unprocessed N-Terminal Signaling And Terminal Autoprocessing Domains,Shhnc;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Shh
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 6.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D, E, B


F, C


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (659 Kb) [Save to disk]
  • Biological Unit Coordinates (6n7g.pdb1.gz) 640 Kb
  • CSU: Contacts of Structural Units for 6N7G
  • Retrieve 6N7G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6N7G from S2C, [Save to disk]
  • View 6N7G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6N7G
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6n7g from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6n7g_C] [6n7g_B] [6n7g_D] [6n7g_A] [6n7g_F] [6n7g_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6N7G
  • Community annotation for 6N7G at PDBWiki (http://pdbwiki.org)

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