6NAZ Transport Protein date Dec 06, 2018
title Crystal Structure Of Diras 23 Chimera In Complex With Gdp
authors Y.H.Gilbert, A.Reger, R.Sharma, J.Bast, C.Kim
compound source
Molecule: Gtp-Binding Protein Di-Ras2,Gtp-Binding Protein D Gtp-Binding Protein Di-Ras2;
Chain: A
Synonym: Distinct Subgroup Of The Ras Family Member 2,Disti Subgroup Of The Ras Family Member 3,Rho-Related Gtp-Binding Rhoi,Distinct Subgroup Of The Ras Family Member 2;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Diras2, Diras3, Arhi, Noey2, Rhoi
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65 2 2
R_factor 0.267 R_Free 0.332
crystal
cell
length a length b length c angle alpha angle beta angle gamma
92.030 92.030 86.520 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.08 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (6naz.pdb1.gz) 52 Kb
  • CSU: Contacts of Structural Units for 6NAZ
  • Structure Factors (187 Kb)
  • Retrieve 6NAZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6NAZ from S2C, [Save to disk]
  • View 6NAZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6NAZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6naz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6naz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6NAZ
  • Community annotation for 6NAZ at PDBWiki (http://pdbwiki.org)

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