6NDJ	Signaling Protein	date	Dec 13, 2018
title	Crystal Structure Of Human Nlrp6 Pyd Domain With Mbp Fusion
authors	C.Shen, T.M.Fu, H.Wu
compound		source
Molecule: Maltosemaltodextrin-Binding Periplasmic Protein, Lrr And Pyd Domains-Containing Protein 6 Chimera; Chain: A, B Fragment: Mbp (Unp Residues 29-387) + Pyd Domain (Unp Resid 106); Synonym: Mmbp,Maltodextrin-Binding Protein,Maltose-Binding Mbp,Angiotensin Iivasopressin Receptor,Pyrin-Containing Ap Protein 5; Engineered: Yes		Organism_scientific: Escherichia Coli, Homo Sapiens Organism_common: Human Organism_taxid: 83333, 9606 Strain: K12 Gene: Male, B4034, Jw3994, Nlrp6, Nalp6, Pypaf5 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1	R_factor 0.187 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 38.283 65.364 102.362 95.63 92.13 106.59
method	X-Ray Diffraction	resolution	2.27 Å
Gene Ontology	Chain Function Process Component A, B carbohydrate transmembrane t...
Primary reference	Molecular mechanism for NLRP6 inflammasome assembly and activation., Shen C, Lu A, Xie WJ, Ruan J, Negro R, Egelman EH, Fu TM, Wu H, Proc Natl Acad Sci U S A. 2019 Feb 5;116(6):2052-2057. doi:, 10.1073/pnas.1817221116. Epub 2019 Jan 23. PMID:30674671

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (298 Kb) [Save to disk] Biological Unit Coordinates (6ndj.pdb1.gz) 148 Kb Biological Unit Coordinates (6ndj.pdb2.gz) 149 Kb CSU: Contacts of Structural Units for 6NDJ Structure Factors (1115 Kb) Retrieve 6NDJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6NDJ from S2C, [Save to disk]

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Structure-derived information

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Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6ndj_A] [6ndj_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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