6NEQ Ribosomal Protein date Dec 18, 2018
title Structure Of Human Mitochondrial Translation Initiation Fact To The Small Ribosomal Subunit-Class-II
authors M.Sharma, R.Koripella, R.Agrawal
compound source
Molecule: 28s Ribosomal Rna, Mitochondrial
Chain: A
 Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S24, Mitochondrial
Chain: C
Synonym: S24mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S5, Mitochondrial
Chain: E
Synonym: S5mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S12, Mitochondrial
Chain: L
Synonym: S12mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S16, Mitochondrial
Chain: P
Synonym: S16mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S17, Mitochondrial
Chain: Q
Synonym: S17mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S22, Mitochondrial
Chain: a
Synonym: S22mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S25, Mitochondrial
Chain: c
Synonym: S25mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S26, Mitochondrial
Chain: d
Synonym: S26mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S27, Mitochondrial
Chain: e
Synonym: S27mt,Mitochondrial Ribosomal Protein S27
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Gene: Mrps27
Expression_system: Bos Taurus
Expression_system_taxid: 9913

Molecule: 28s Ribosomal Protein S34, Mitochondrial
Chain: j
Synonym: S34mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S18b, Mitochondrial
Chain: p
Synonym: S18mt-B,28s Ribosomal Protein S18-2,Mitochondrial,
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S7, Mitochondrial
Chain: G
Synonym: S7mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S9, Mitochondrial
Chain: I
Synonym: S9mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S10, Mitochondrial
Chain: J
Synonym: S10mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S14, Mitochondrial
Chain: N
Synonym: S14mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: Dap3 Protein
Chain: g
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S31, Mitochondrial
Chain: h
Synonym: S31mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S33, Mitochondrial
Chain: I
Synonym: S33mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S35, Mitochondrial
Chain: k
Synonym: S35mt,28s Ribosomal Protein S28,Mitochondrial,S28m
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: Coiled-Coil-Helix-Coiled-Coil-Helix Domain Contai
Chain: m
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: Pentatricopeptide Repeat Domain-Containing Protei Mitochondrial;
Chain: o
Synonym: 28s Ribosomal Protein S39,Mitochondrial,Mrp-S39,28 Ribosomal Protein S39,Mitochondrial,Mrp-S39;
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S2, Mitochondrial
Chain: B
Synonym: S2mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S6, Mitochondrial
Chain: F
Synonym: S6mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S11, Mitochondrial
Chain: K
Synonym: S11mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S15, Mitochondrial
Chain: O
Synonym: S15mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S18c, Mitochondrial
Chain: R
Synonym: S18mt-C,28s Ribosomal Protein S18-1,Mitochondrial,
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S21, Mitochondrial
Chain: U
Synonym: S21mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S23, Mitochondrial
Chain: b
Synonym: S23mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: 28s Ribosomal Protein S28, Mitochondrial
Chain: f
Synonym: S28mt
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: Aurora Kinase A Interacting Protein 1
Chain: n
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913

Molecule: Translation Initiation Factor If-3, Mitochondrial
Chain: z
Fragment: Residues 32-278
Synonym: If3mt
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.32 Å
Gene
Ontology
ChainFunctionProcessComponent
B


C


E


F


G


I


J


K

  • mitochondrial small ribosoma...
    • L


    N


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    P


    Q


    R


    U


    a


    b


    c


    d


    e


    f


    g


    h


    i


    j


    k


    m


    n


    o


    p


    z


    Primary referenceStructure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit., Koripella RK, Sharma MR, Haque ME, Risteff P, Spremulli LL, Agrawal RK, iScience. 2019 Feb 22;12:76-86. doi: 10.1016/j.isci.2018.12.030. Epub 2019 Jan 3. PMID:30677741
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1180 Kb) [Save to disk]
  • Biological Unit Coordinates (6neq.pdb1.gz) 1166 Kb
  • CSU: Contacts of Structural Units for 6NEQ
  • Retrieve 6NEQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6NEQ from S2C, [Save to disk]
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    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6neq_Q] [6neq_p] [6neq_E] [6neq_L] [6neq_G] [6neq_a] [6neq_B] [6neq_d] [6neq_N] [6neq_k] [6neq_K] [6neq_c] [6neq_f] [6neq_U] [6neq_R] [6neq_P] [6neq_F] [6neq_b] [6neq_J] [6neq_z] [6neq_n] [6neq_i] [6neq_g] [6neq_h] [6neq_O] [6neq_C] [6neq_A] [6neq_j] [6neq_o] [6neq_m] [6neq_I] [6neq_e]
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  • Domain organization of by SWISSPFAM
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