6NG3 Immune System date Dec 21, 2018
title Crystal Structure Of Human Cd160 And Hvem Complex
authors W.Liu, J.Bonanno, S.C.Almo
compound source
Molecule: Cd160 Antigen,Tumor Necrosis Factor Receptor Supe Member 14;
Chain: A
Synonym: Natural Killer Cell Receptor By55,Herpes Virus Ent Mediator A,Hvea,Tumor Necrosis Factor Receptor-Like 2,Tr2;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cd160, By55, Tnfrsf14, Hvea, Hvem, Unq329pro509
Expression_system: Drosophila Acanthoptera
Expression_system_taxid: 51166
symmetry Space Group: I 41 2 2
R_factor 0.234 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.930 87.930 157.698 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.88 Å
ligand BMA, MG, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (6ng3.pdb1.gz) 34 Kb
  • LPC: Ligand-Protein Contacts for 6NG3
  • CSU: Contacts of Structural Units for 6NG3
  • Structure Factors (212 Kb)
  • Retrieve 6NG3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6NG3 from S2C, [Save to disk]
    • View 6NG3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6NG3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ng3_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6NG3
  • Community annotation for 6NG3 at PDBWiki (http://pdbwiki.org)

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