6NGM Oxidoreductase Oxidoreductase Inhibitor date Dec 21, 2018
title Structure Of Rat Neuronal Nitric Oxide Synthase Heme Domain With (R)-6-(3-Fluoro-5-(2-(1-Methylpyrrolidin-2-Yl)Ethyl)Ph 4-Methylpyridin-2-Amine
authors H.Li, T.L.Poulos
compound source
Molecule: Nitric Oxide Synthase, Brain
Chain: A, B
Synonym: Bnos,Constitutive Nos,Nc-Nos,Nos Type I,Neuronal N Peptidyl-Cysteine S-Nitrosylase Nos1;
Ec: 1.14.13.39
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Organ: Brain
Gene: Nos1, Bnos
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcwori
symmetry Space Group: P 21 21 21
R_factor 0.183 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.864 110.701 164.584 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.69 Å
ligand ACT, H4B, HEM, KMD, ZN enzyme Oxidoreductase E.C.1.14.13.39 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceOptimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold., Do HT, Li H, Chreifi G, Poulos TL, Silverman RB, J Med Chem. 2019 Feb 25. doi: 10.1021/acs.jmedchem.8b02032. PMID:30802056
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (300 Kb) [Save to disk]
  • Biological Unit Coordinates (6ngm.pdb1.gz) 293 Kb
  • LPC: Ligand-Protein Contacts for 6NGM
  • CSU: Contacts of Structural Units for 6NGM
  • Structure Factors (4237 Kb)
  • Retrieve 6NGM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6NGM from S2C, [Save to disk]
  • View 6NGM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6NGM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ngm_B] [6ngm_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6NGM
  • Community annotation for 6NGM at PDBWiki (http://pdbwiki.org)

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