6NYJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component J, B, F, A, D, K, C, H, E, I, L, G
Primary reference	Cryo-EM structures of Helicobacter pylori vacuolating cytotoxin A oligomeric assemblies at near-atomic resolution., Zhang K, Zhang H, Li S, Pintilie GD, Mou TC, Gao Y, Zhang Q, van den Bedem H, Schmid MF, Au SWN, Chiu W, Proc Natl Acad Sci U S A. 2019 Mar 20. pii: 1821959116. doi:, 10.1073/pnas.1821959116. PMID:30894496

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1221 Kb) [Save to disk] Biological Unit Coordinates (6nyj.pdb1.gz) 1216 Kb CSU: Contacts of Structural Units for 6NYJ Retrieve 6NYJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6NYJ from S2C, [Save to disk]

View 6NYJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6nyj_H] [6nyj_A] [6nyj_B] [6nyj_C] [6nyj_D] [6nyj_E] [6nyj_F] [6nyj_G] [6nyj_I] [6nyj_J] [6nyj_K] [6nyj_L] SWISS-PROT database:

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