6O0S Signaling Protein date Feb 17, 2019
title Crystal Structure Of The Tandem Sam Domains From Human Sarm1
authors S.Horsefield, H.Burdett, X.Zhang, M.K.Manik, Y.Shi, J.Chen, Q.Tian J.Gilley, J.Lai, W.Gu, M.Rank, N.Deerain, L.Casey, D.J.Ericsson, G R.O.Hughes, T.Bosanac, M.Von Itzstein, J.P.Rathjen, J.D.Nanson, I.B.Dry, S.J.Williams, B.J.Staskawicz, M.P.Coleman, T.Ve, P.N.Do B.Kobe
compound source
Molecule: Sterile Alpha And Tir Motif-Containing Protein 1
Chain: A, B, C, D, E, F, G, H
Synonym: Sterile Alpha And Armadillo Repeat Protein,Sterile Motif Domain-Containing Protein 2,Sam Domain-Containing Pro Tir-1 Homolog;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sarm1, Kiaa0524, Samd2, Sarm
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 1 2 1
R_factor 0.205 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.610 154.460 121.882 90.00 93.82 90.00
method X-Ray Diffractionresolution 2.70 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (403 Kb) [Save to disk]
  • Biological Unit Coordinates (6o0s.pdb1.gz) 388 Kb
  • CSU: Contacts of Structural Units for 6O0S
  • Structure Factors (1815 Kb)
  • Retrieve 6O0S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6O0S from S2C, [Save to disk]
  • View 6O0S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6O0S
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6o0s from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6o0s_E] [6o0s_D] [6o0s_A] [6o0s_C] [6o0s_G] [6o0s_H] [6o0s_B] [6o0s_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6O0S
  • Community annotation for 6O0S at PDBWiki (http://pdbwiki.org)

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