6O0T Signaling Protein date Feb 17, 2019
title Crystal Structure Of Selenomethionine Labelled Tandem Sam Do (L446m:L505m:L523m Mutant) From Human Sarm1
authors S.Horsefield, H.Burdett, X.Zhang, M.K.Manik, Y.Shi, J.Chen, Q.Tian J.Gilley, J.Lai, W.Gu, M.Rank, N.Deerain, L.Casey, D.J.Ericsson, G R.O.Hughes, T.Bosanac, M.Von Itzstein, J.P.Rathjen, J.D.Nanson, I.B.Dry, S.J.Williams, B.J.Staskawicz, M.P.Coleman, T.Ve, P.N.Do B.Kobe
compound source
Molecule: Sterile Alpha And Tir Motif-Containing Protein 1
Chain: A, B, C, D, E, F, G, H
Synonym: Sterile Alpha And Armadillo Repeat Protein,Sterile Motif Domain-Containing Protein 2,Sam Domain-Containing Pro Tir-1 Homolog;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sarm1, Kiaa0524, Samd2, Sarm
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 1 2 1
R_factor 0.200 R_Free 0.238
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.240 154.080 120.995 90.00 94.55 90.00
method X-Ray Diffractionresolution 2.80 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (407 Kb) [Save to disk]
  • Biological Unit Coordinates (6o0t.pdb1.gz) 386 Kb
  • CSU: Contacts of Structural Units for 6O0T
  • Structure Factors (1299 Kb)
  • Retrieve 6O0T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6O0T from S2C, [Save to disk]
  • View 6O0T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6O0T
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6o0t from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6o0t_E] [6o0t_G] [6o0t_F] [6o0t_B] [6o0t_H] [6o0t_A] [6o0t_C] [6o0t_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6O0T
  • Community annotation for 6O0T at PDBWiki (http://pdbwiki.org)

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