6O4W Hydrolase date Mar 01, 2019
title Binary Complex Of Native Hache With Donepezil
authors O.Gerlits, A.Kovalevsky, Z.Radic
compound source
Molecule: Acetylcholinesterase
Chain: A, B
Fragment: Residues 32-578
Synonym: Ache
Ec: 3.1.1.7
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ache
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293
symmetry Space Group: P 31
R_factor 0.186 R_Free 0.212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
123.792 123.792 129.413 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.35 Å
ligand
enzyme Hydrolase E.C.3.1.1.7 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • acetylcholine catabolic proc...
  • acetylcholine catabolic proc...

  • Primary referenceA new crystal form of human acetylcholinesterase for exploratory room-temperature crystallography studies., Gerlits O, Ho KY, Cheng X, Blumenthal D, Taylor P, Kovalevsky A, Radic Z, Chem Biol Interact. 2019 Jun 6. pii: S0009-2797(19)30361-8. doi:, 10.1016/j.cbi.2019.06.011. PMID:31176713
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (6o4w.pdb1.gz) 181 Kb
  • CSU: Contacts of Structural Units for 6O4W
  • Structure Factors (1229 Kb)
  • Retrieve 6O4W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6O4W from S2C, [Save to disk]
  • View 6O4W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6O4W
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6o4w from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6o4w_B] [6o4w_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6O4W
  • Community annotation for 6O4W at PDBWiki (http://pdbwiki.org)

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