6O9I	Immune System	date	Mar 13, 2019
title	Ternary Complex Of Mouse Ecd With Fab1 And Fab2
authors	X.Min, Z.Wang
compound		source
Molecule: Fab1 Heavy Chain Chain: A Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_taxid: 10029
Molecule: Fab1 Light Chain Chain: B Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_taxid: 10029
Molecule: Gastric Inhibitory Polypeptide Receptor Chain: C Synonym: Gip-R,Glucose-Dependent Insulinotropic Polypeptide Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Gipr Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Fab 2 Heavy Chain Chain: D Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_taxid: 10029
Molecule: Fab2 Light Chain Chain: E Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_taxid: 10029
symmetry	Space Group: P 1	R_factor 0.216 R_Free 0.266
crystal cell	length a length b length c angle alpha angle beta angle gamma 41.430 43.680 133.820 87.86 88.38 81.17
method	X-Ray Diffraction	resolution	2.60 Å
ligand	EDO, PCA	enzyme
Gene Ontology	Chain Function Process Component C
Primary reference	Molecular mechanism of an antagonistic antibody against glucose-dependent insulinotropic polypeptide receptor., Min X, Yie J, Wang J, Chung BC, Huang CS, Xu H, Yang J, Deng L, Lin J, Chen Q, Abbott CM, Gundel C, Thibault SA, Meng T, Bates DL, Lloyd DJ, Veniant MM, Wang Z, MAbs. 2020 Jan-Dec;12(1):1710047. doi: 10.1080/19420862.2019.1710047. PMID:31905038

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (322 Kb) [Save to disk] Biological Unit Coordinates (6o9i.pdb1.gz) 310 Kb LPC: Ligand-Protein Contacts for 6O9I CSU: Contacts of Structural Units for 6O9I Structure Factors (1538 Kb) Retrieve 6O9I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6O9I from S2C, [Save to disk]

View 6O9I in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6O9I

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6o9i_C] [6o9i_B] [6o9i_D] [6o9i_E] [6o9i_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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