6ODD Biosynthetic Protein date Mar 26, 2019
title Crystal Structure Of The Human Complex Acp-Isd11
authors M.G.Herrera, M.E.Noguera, S.Klinke, J.Santos
compound source
Molecule: Acyl Carrier Protein, Mitochondrial
Chain: A
Synonym: Acp,Ci-Sdap,Nadh-Ubiquinone Oxidoreductase 9.6 Kda
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ndufab1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Lyr Motif-Containing Protein 4
Chain: B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lyrm4, C6orf149, Isd11, Cgi-203
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 21 3
R_factor 0.193 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
123.190 123.190 123.190 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand 8Q1, CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (6odd.pdb1.gz) 162 Kb
  • Biological Unit Coordinates (6odd.pdb2.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 6ODD
  • CSU: Contacts of Structural Units for 6ODD
  • Structure Factors (536 Kb)
  • Retrieve 6ODD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ODD from S2C, [Save to disk]
    • View 6ODD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6ODD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6odd_B] [6odd_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6ODD
  • Community annotation for 6ODD at PDBWiki (http://pdbwiki.org)

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