6OQU	Membrane Protein	date	Apr 29, 2019
title	E. Coli Atp Synthase State 1d
authors	A.G.Stewart, M.Sobti, J.L.Walshe
compound		source
Molecule: Atp Synthase Subunit Delta Chain: W Synonym: Atp Synthase F(1) Sector Subunit Delta,F-Type Atpa Delta,F-Atpase Subunit Delta; Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Atph, Hmpref1611_00658 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Atp Synthase Subunit Alpha Chain: C, B, A Synonym: Atp Synthase F1 Sector Subunit Alpha,F-Atpase Subu Ec: 7.1.2.2 Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Atpa, Ad31_4476 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Atp Synthase Subunit B Chain: X, Y Synonym: Atp Synthase F(0) Sector Subunit B,Atpase Subunit Atpase Subunit B,F-Atpase Subunit B; Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Atpf, Ad31_4478 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Atp Synthase Epsilon Chain Chain: H Synonym: Atp Synthase F1 Sector Epsilon Subunit,F-Atpase Ep Subunit; Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Atpc, Ccu01_030215 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Atp Synthase Gamma Chain Chain: G Synonym: Atp Synthase F1 Sector Gamma Subunit,F-Atpase Gamm Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Atpg, Bn16_43751 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Atp Synthase Subunit Beta Chain: F, E, D Synonym: Atp Synthase F1 Sector Subunit Beta,F-Atpase Subun Ec: 7.1.2.2 Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Atpd, Cdco157_4410 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Atp Synthase Subunit C Chain: J, L, M, N, O, P, Q, R, I, S Synonym: Atp Synthase F(0) Sector Subunit C,F-Type Atpase S F-Atpase Subunit C,Lipid-Binding Protein; Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Atpe, Ecjg_03465 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Atp Synthase Subunit A Chain: a Synonym: Atp Synthase F0 Sector Subunit A,F-Atpase Subunit Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Atpb Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	3.20 Å
ligand	ADP, ATP, MG, PO4	enzyme	E.C.7.1.2.2 BRENDA
Gene Ontology	Chain Function Process Component C, A, B F, E, D G H S, N, Q, M, L, J, O, P, I, R W Y, X a
Primary reference	Cryo-EM structures provide insight into how E. coli F1Fo ATP synthase accommodates symmetry mismatch., Sobti M, Walshe JL, Wu D, Ishmukhametov R, Zeng YC, Robinson CV, Berry RM, Stewart AG, Nat Commun. 2020 May 26;11(1):2615. doi: 10.1038/s41467-020-16387-2. PMID:32457314

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (664 Kb) [Save to disk] Biological Unit Coordinates (6oqu.pdb1.gz) 658 Kb LPC: Ligand-Protein Contacts for 6OQU CSU: Contacts of Structural Units for 6OQU Retrieve 6OQU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6OQU from S2C, [Save to disk]

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Visual 3D analysis of 6OQU

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6oqu_a] [6oqu_F] [6oqu_M] [6oqu_B] [6oqu_L] [6oqu_S] [6oqu_I] [6oqu_P] [6oqu_G] [6oqu_C] [6oqu_E] [6oqu_X] [6oqu_Y] [6oqu_Q] [6oqu_N] [6oqu_O] [6oqu_D] [6oqu_W] [6oqu_H] [6oqu_J] [6oqu_R] [6oqu_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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